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Not reproducible #562
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And even worse, if I change the number of threads to 1 I get very different results:
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Examining thread dependency a bit more:
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If I revert to version 0.20.1 then things are repreoducible (and give me a different result than any of those above: 42341 reads are removed for being too short). That is on par with what trimmomatic returns and is probably the correct result. |
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Version 0.23.4
I get a different number of reads and bases after filtering every time I run fastp
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