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Multiple gene lists comparison #45

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gurpreet-bioinfo opened this issue Nov 4, 2022 · 1 comment
Open

Multiple gene lists comparison #45

gurpreet-bioinfo opened this issue Nov 4, 2022 · 1 comment

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@gurpreet-bioinfo
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Hi @federicomarini,

I am wondering if it is possible to compare multiple gene lists in GeneTonic?

Thanks.
Gurpreet

@federicomarini
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Hi @gurpreet-bioinfo ,
At the moment multiple gene(set) lists can be handled in the functions defined in https://github.com/federicomarini/GeneTonic/blob/master/R/gs_summaries.R - gs_summary_overview_pair() and gs_horizon() might be a good place to look into.
This is feasible not in the app context, as in there the design was focused on a single contrast - and all the downstream parts that come after that.
HTH,
Federico

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