To map a given pair of motif-domain or domain-domain onto the best PDB complex
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Updated
Jul 14, 2020 - Python
To map a given pair of motif-domain or domain-domain onto the best PDB complex
Un script de python que usa BLAST, MUSCLE y PROSITE para analizar una serie de proteínas
Local Sequence Alignment Tool for Probabilistic DNA databases
Using BLAST and Transdecoder.
Convert the output of BLAST to a BED file format that's suitable for uploading to JBrowse.
Blast wrapper using snakemake to generate correspondance between a list of transcript or protein and some proteomes.
A repository containing all the file projects that I have for the Bioinformatics 3 (COMP 4312b) course.
BLAST database - sponge EMP deblurred subOTUs 1.0
Helper GUI tool to run BLAST locally and view the summary graphically
My first Python script: a simple algorithm to compare sequences with variable input region not relying on any additional packages.
Retrieve and create a custom BLAST database by taxonomic search
Whole genome sequencing (WGS) was combined with bioinformatics tools to investigate the epidemiology of Vibrio cholerae in the Philippines and in other cholera affected countries.
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