cell-segmentation
Here are 97 public repositories matching this topic...
Quantifying 2D cell shape and epithelial tissue dynamics
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Sep 22, 2023 - Python
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Nov 26, 2023 - MATLAB
Source code for the paper "Cyto R-CNN and CytoNuke Dataset: Towards reliable whole-cell segmentation in bright-field histological images"
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May 26, 2024 - Python
Cell segmentation using convolutional natural networks
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Jul 16, 2022 - Python
Deep learning method presented in the Translational Vision Science & Technology (TVST) journal to segment cells from corneal endothelium images obtained with specular microscopy and subsequently infer the corneal parameters.
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Apr 29, 2022 - Jupyter Notebook
Official and maintained implementation of the dataset paper "The TYC Dataset for Understanding Instance-Level Semantics and Motions of Cells in Microstructures" [ICCVW 2023].
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Sep 14, 2023 - Python
🔬 A U-Net based deep learning architecture for cell segmentation
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May 7, 2019 - Python
MIC-MAQ for Microscopy Images of Cells - Multi Analyses and Quantifications is an ImageJ/Fiji Plugin for automatic segmentation of nuclei and/or cells for quantifications in other channels including foci detection
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Jun 12, 2024 - Java
This repository contains the Unet architecture built with Pytorch library. Here, the Unet architecture is used to perform the image segmentation.
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Sep 29, 2021 - Python
pipeline that converts Deepcell generated instance segmentation masks of nuclei from an ome-tiff to Cell Objects with auto-generated cytoplasms in QuPath
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Mar 1, 2024 - Jupyter Notebook
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Mar 10, 2017 - Java
Application of polarized optical microscopy-based MFA imaging and semantic segmentation-based cell-by-cell anatomy measurement to hardwoods having various anatomical characteristics
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Jul 5, 2023 - Jupyter Notebook
I am pursuing Machine Learning Course at Ahmedabad University. This Repository contains the Code and Dataset, of the paper to be Reproduced during this course.
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May 5, 2023 - Jupyter Notebook
A small GUI application for counting cells in microscope images
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Feb 22, 2019 - Python
HistoJS: Web-Based Analytical Tool for Multiplexed Images. Limited Github Online Demo 👇
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Feb 29, 2024 - JavaScript
Research project to track movement of Hepatoceullar Carcinoma cells.
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Mar 18, 2022 - Jupyter Notebook
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Nov 15, 2022
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Nov 16, 2023 - Python
Example workflows for image processing, segmentation and analysis. Stitching and alignment functions also implemented.
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Nov 15, 2023 - Jupyter Notebook
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