This is a working repository. Do not expect any clean codes.

Applied category theory library in several languages

For doing multidimensional recurrent quantification analysis(MdRQA) and sliding window version of it

Galactic and Gravitational Dynamics in Python (+ GPU and autodiff)

Pytorch-based framework for solving parametric constrained optimization problems, physics-informed system identification, and parametric model predictive control.

Tools for the exploration of chaos and nonlinear dynamics

Sample codes for training of dynamical system prediction from sparse observations using deep neural networks with Voronoi tessellation and physics constraints (DSOVT) by Wang et al.

Library for computer-assisted proofs in dynamical systems

A multi-body simulation software

Numerical differential equation solvers in JAX. Autodifferentiable and GPU-capable. https://docs.kidger.site/diffrax/

Compute invariant manifolds of nonlinear maps

A package for the sparse identification of nonlinear dynamical systems from data

An open-source toolkit for entropic data analysis.

Open-source, graph-based Python code generator and analysis toolbox for dynamical systems (pre-implemented and custom models). Most pre-implemented models belong to the family of neural population models.

Inclusive model of expression dynamics with conventional or metabolic labeling based scRNA-seq / multiomics, vector field reconstruction and differential geometry analyses

R package for statistical inference using partially observed Markov processes

dynamics, age and metallicity indicators tracing evolution

The official respository for noise-aware physics-informed machine learning (nPIML)

Projects, models, and proofs in KeYmaera X

A Python package for spectral proper orthogonal decomposition (SPOD).