[Under active development] Methods for simulating and analysing the sizes and lengths of infectious disease transmission chains from branching process models
-
Updated
Jun 3, 2024 - R
[Under active development] Methods for simulating and analysing the sizes and lengths of infectious disease transmission chains from branching process models
Detect iSNV and construct whole viral genomes from metagenomic samples
Epidemiology modelling framework for the Thanzi la Onse project
An API, a query engine, and a database schema for genomic sequences; currently with a focus on SARS-CoV-2
Personal page of Julien Arino
Optimization of Self- or Parent-Reported Psychiatric Phenotypes in Longitudinal Studies
R Package for Analyzing John Snow's 1854 Cholera Map
CovsirPhy: Python library for COVID-19 analysis with phase-dependent SIR-derived ODE models.
R package with tools for estimating vaccine effectiveness and vaccine related metrics
CRAN Task View: Epidemiology
Repository for the R for Epidemiology book
Functions to simplify and standardise antimicrobial resistance (AMR) data analysis and to work with microbial and antimicrobial properties by using evidence-based methods, as described in https://doi.org/10.18637/jss.v104.i03.
Python package for statistical inference and forecast of epi models using multiple signals
R interface to the CDC National Public Health Tracking Network API
This is the repository for my R notes bookdown project.
A general framework for quick epidemiological ABM models
R package to clean and standardize epidemiological data
Add a description, image, and links to the epidemiology topic page so that developers can more easily learn about it.
To associate your repository with the epidemiology topic, visit your repo's landing page and select "manage topics."