Comparative Genomics Toolkit 3

CmdStanR: the R interface to CmdStan

Image-processing software for cryo-electron microscopy

A utility library for performing amplitude analysis on particle physics data.

RAxML Next Generation: faster, easier-to-use and more flexible

spatialreg: spatial models estimation and testing

A pipeline to select optimal markers for microbial phylogenomics and species tree estimation using the multispecies coalescent and concatenation approaches

Clasificador de reseñas usando el modelo Regresión Logística con el algoritmo Máxima verosimilitud.

Python+Rust implementation of the Probabilistic Principal Component Analysis model

A multi-algorithmic framework for phylogenetic inference

Survival analysis in Python

Statistical tools for toroidal diffusions. Software companion for "Langevin diffusions on the torus: estimation and applications"

Ancestral character reconstruction and visualisation for rooted phylogenetic trees

Analysing Age-Specific Death Rates with MixedModels.jl

BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins

An R package for maximum likelihood estimation of univariate densities.

CGR package for phylogeny. Pipeline compare multiple whole genome sequences using alignment free approach Chaos Game Representation (CGR). CRG core function creates the frequencies object for each sequence which can be used to calculate distances among sequences.

Talleres Internacionales de Bioinformática - Centro de Ciencias Genómicas, UNAM, Cuernavaca, México

Python package for frontier analysis

Maximum Likelihood Estimation Using a Rotten tomatoes database.