BioJS component for PCViz
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Updated
Sep 13, 2015 - JavaScript
BioJS component for PCViz
SPECifIC - Sub-Pathway ExtraCtor and enrICher
█ 𝐓𝐇𝐈𝐒 𝐈𝐒 𝐀 𝐌𝐈𝐑𝐑𝐎𝐑 𝐎𝐅 𝐓𝐇𝐄 𝐒𝐀𝐌𝐄 𝐑𝐄𝐏𝐎𝐒𝐈𝐓𝐎𝐑𝐘 𝐎𝐍 𝐁𝐈𝐓𝐁𝐔𝐂𝐊𝐄𝐓 – 𝐓𝐇𝐈𝐒 𝐏𝐀𝐆𝐄 𝐈𝐒 𝐍𝐎𝐓 𝐌𝐎𝐍𝐈𝐓𝐎𝐑𝐄𝐃 – 𝐏𝐋𝐄𝐀𝐒𝐄 𝐒𝐄𝐄 𝐓𝐇𝐄 𝐁𝐈𝐓𝐁𝐔𝐂𝐊𝐄𝐓 𝐏𝐀𝐆𝐄 𝐅𝐎𝐑 𝐓𝐇𝐄 𝐋𝐀𝐓𝐄𝐒𝐓 𝐃𝐄𝐓𝐀𝐈𝐋𝐒
An example on how to use reactome Rest API
Overrepresentation analysis for KEGG and PID pathways using community detection
Disease pathways in the human interactome
KNIME nodes for WikiPathways.
Integrated analysis of Cross-platform MicroArray and Pathway data
This repository is in support of the PathCORE-T paper (https://doi.org/10.1101/147645). It contains all the code and necessary data/metadata to repeat all analyses in the paper.
A wrapper around Bio2BEL HGNC for ComPath
Just another wrapper for pathway analysis using MAGMA
Analyze and compare different pathway resources
A manually curated database of human gut metabolic modules.
WikiPathways Summit Planning
Testing, development environment for a new project of KN BIBS
A Reference Pathways Mapper for turning metagenomic functional profiles into pathway/module profiles.
Investigating the use of hierarchical modelling for pathway analyses
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