Neuron Image Analyzer: Automated and Accurate Extraction of Neuronal Data from Low Quality Images
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Updated
Aug 3, 2016 - MATLAB
Neuron Image Analyzer: Automated and Accurate Extraction of Neuronal Data from Low Quality Images
A tiny MATLAB script for converting the skeletonization data provided by Helmstaedter et al., Nature 2013 from .mat format to .swc format.
Persistence-inspired concepts for skeleton analysis
Create and manipulate digital skeletons
Create and manipulate digital skeletons
Mesh Skeleton Extraction Using Laplacian Contraction
A GUI environment for rendering, correcting, and converting between SWC and HOC formats of neuron model data.
This repository contains code about project to Virtual Realty exam of Department of Science and Tecnology of University of Naples Parthenope.
Javascript implementation of image skeletonization
Implementation of Basic Digital Image Processing Tasks in Python / OpenCV
A set of tools for manipulation of the .nml, .swc, .zip, and .hoc files generated from webKnossos and related software. Used for processing of segmentation and skeletonization data.
Tools and wrappers for skeletonization.
All assignments completed as a part of my Digital Image Processing Course
Variable based skeletonization of traversal heatmaps. Uses gradients, region labelling, thresholding, and blurring techniques. Also supports downloading multi-scale imagery from tile servers.
Straight Skeleton algorithm, ported to Swift from the Polyskel Python library
A collection of scripts to automate the steps for the quantification of vascular-like structures in 3D using Amira, Fiji/ImageJ and WinFiber3D.
Straight skeleton implementation in Python
Skeletonide is a parallel implementation of Zhang-Suen morphological thinning algorithm written in Halide-lang. Use it for fast skeletonization of binary masks on the GPU.
This repository implements skeleton matching algorithm.
In this repository you can see the code for skeletonization of binary images using our novel fuzzy inference system.
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