Popular repositories
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spatialLIBD
spatialLIBD PublicCode for the spatialLIBD R/Bioconductor package and shiny app
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HumanPilot
HumanPilot PublicSpatial Transcriptomics human DLPFC pilot study part of the spatialLIBD project
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10xPilot_snRNAseq-human
10xPilot_snRNAseq-human Public10x snRNA-seq study on 5 postmortem human brain regions across the reward circuitry: NAc, AMY, sACC, DLPFC, and HPC
Repositories
- visiumStitched Public
R package containing functions useful for stitching Visium capture areas. Related to https://github.com/LieberInstitute/LS_visiumStitched
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- spatialDLPFC Public
spatialDLPFC project involving Visium (n = 30), Visium SPG (n = 4) and snRNA-seq (n = 19) samples
- template_project Public template
Template project following the guidelines from https://lcolladotor.github.io/bioc_team_ds/organizing-your-work.html#.YzL43uzMKX0
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- recountWorkflow Public
Public repo for the recount Bioconductor workflow that is visible at http://bioconductor.org/help/workflows/
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- sex_differences_sz Public
Sex differences in schizophrenia across the caudate nucleus, DLPFC, and hippocampus