Pinned

1. epinowcast/epinowcast epinowcast/epinowcast Public

   Tools to enable flexible and efficient hierarchical nowcasting of epidemiological time-series using a semi-mechanistic Bayesian model with support for a range of reporting and generative processes.

   R 52 21

2. methodologies-npi-effects methodologies-npi-effects Public

   The methodologies to assess the effects of non-pharmaceutical interventions during COVID-19: a systematic review

   6

3. EpiSewer EpiSewer Public

   An R package and Bayesian generative model to estimate effective reproduction numbers from wastewater concentration measurements over time.

   R 12

4. generative-nowcasting generative-nowcasting Public

   Generative nowcasting models that account for cases with missing reference date and model an underlying renewal process of infections. This allows to conduct missing data imputation, nowcasting and…

   R 6 1

5. interval-scoring interval-scoring Public

   This repository contains python implementations of scoring rules for forecasts provided in a prediction interval format.

   Jupyter Notebook 7 2

6. gnn-community-detection gnn-community-detection Public

   Graph Neural Networks for Community Detection

   Jupyter Notebook 59 14