Bioinformatics Scientist at @LaborBerlin, prev at MDC Berlin, KU.dk, Uni Leipzig
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bioinformatics-centre/kaiju
bioinformatics-centre/kaiju PublicFast taxonomic classification of metagenomic sequencing reads using a protein reference database
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score-assemblies
score-assemblies PublicSnakemake workflow for scoring and comparing multiple bacterial genome assemblies (Illumina, Nanopore) to reference genome(s)
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ont-assembly-snake
ont-assembly-snake PublicSnakemake workflow for bacterial genome assembly + polishing for Oxford Nanopore (ONT) sequencing using multiple tools
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