Skip to content

predictiveworks/deep-graph

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

38 Commits
 
 
 
 
 
 
 
 

Repository files navigation

DeepGraph

DeepGraph supports a 360° view on graph technology and supports analytics, storage and visualization. It is one of the building blocks of a 4D architecture for AI-driven applications.

DeepGraph complemented by DeepPipes, DeepLearning and DeepThreat supports the entire journey from data to information to knowledge. DeepGraph is based on GraphFrames, extends its functionality and thereby supports GraphFrame's mission to provide a unified approach from data to knowledge.

Analytics

DeepGraph supports a GraphFrame-based interface to the following algorithms:

Centrality

Betweenness

Betweenness centrality measures the number of times a node lies on the shortest path between other nodes. DeepGraph supports a space-efficient parallel algorithm developed by Edmonds, and also an optimized version developed by Hua et al.

Betweenness centrality is a way of detecting the amount of influence a node has over the flow of information in a graph. It is often used to find nodes that serve as a bridge from one part of a graph to another.

def betweenness(graphframe:GraphFrame, `type`:String = "edmonds"):DataFrame

Closeness

Closeness centrality scores each node based on its closeness to all other nodes in the network. This measure calculates the shortest paths between all nodes, then assigns each node a score based on the inverted sum of shortest paths (farness) from a given node to all other nodes.

Closeness centrality is a way of detecting nodes that are able to spread information very efficiently through a graph.

def closeness(graphframe:GraphFrame):DataFrame

Clustering

The local clustering coefficient of a vertex determines how close its neighbors are. It is calculated as the number of existing connections in the neighborhood divided by number of all possible connections.

def clustering(graphframe:GraphFrame):DataFrame

Degree

Degree centrality assigns an importance score based simply on the number of (in- and outgoing) links held by each vertex.

def degree(graphframe:GraphFrame):DataFrame

Eigenvector

Eigenvector centrality is an algorithm that measures the transitive influence of nodes based on the based on the number of links it has to other nodes in the network. Eigenvector centrality extends link degree centrality by also taking into account how well-connected a node is, and how many links its connections have, and so on through the network.

By calculating the extended connections of a node, Eigen centrality can identify nodes with influence over the whole network, not just those directly connected to it. It is a good 'all-round' SNA score, handy for understanding human social networks, but also for understanding networks like malware propagation.

def eigenvector(graphframe:GraphFrame):DataFrame

Freeman's Network Centrality

Freeman's network centrality is a means to determine the heterogeneity of the degree centrality among all the vertices of the network.

def freeman(graphframe:GraphFrame):Double

Neighborhood Connectivity

Neighborhood connectivity is a measure based on degree centrality, and computes the average connectivity of the neighbors of a given vertex. Here, connectivity is the degree centrality of a vertex.

def neighborhood(graphframe:GraphFrame):DataFrame

Page Rank

PageRank is a variant of EigenCentrality, also assigning nodes a score based on their connections, and their connections’ connections.

The difference is that PageRank also takes link direction and weight into account – so links can only pass influence in one direction, and pass different amounts of influence.

This measure uncovers nodes whose influence extends beyond their direct connections into the wider network. Because it takes into account direction and connection weight, PageRank can be helpful for understanding citations and authority.

PageRank is famously one of the ranking algorithms behind the original Google search engine (the ‘Page’ part of its name comes from the creator and Google founder, Sergei Brin).

def pageRank(graphframe:GraphFrame, maxIter:Int = 20, resetProbability:Double=0.15):DataFrame

DeepGraph also supports the personalized PageRank algorithm.

def personalizedPageRank(graphframe:GraphFrame, landmarks:Array[Any], maxIter:Int = 20, resetProbability:Double=0.15): DataFrame

Community Detection

Connected Components

def connectedComponents(graphframe:GraphFrame):DataFrame

Label Propagation (LPA)

Each node in the network is initially assigned to its own community. At every super step, nodes send their community affiliation to all neighbors and update their state to the mode community affiliation of incoming messages.

LPA is a standard community detection algorithm for graphs. It is very inexpensive computationally, although (1) convergence is not guaranteed and (2) one can end up with trivial solutions (all nodes are identified into a single community).

This method runs the GraphFrame Label Propagation Algorithm for detecting communities in networks.

def detectCommunities(graphframe:GraphFrame, iterations:Int):DataFrame

This method leverages the GraphX implementation of Community Detection as an alternative approach.

def detectCommunities(graphframe:GraphFrame, epsilon:Double=0.1):DataFrame

Louvain

DeepGraph supported a distributed version of the Louvain algorithm to detect communities in large networks.It maximizes a modularity score for each community, where the modularity quantifies the quality of an assignment of nodes to communities.

The Louvain algorithm is a hierarchical clustering algorithm, that recursively merges communities into a single node and executes the modularity clustering on the condensed graphs.

def louvain(graphframe:GraphFrame, minProgress:Int, progressCounter:Int):DataFrame

Network Modularity

Modularity measures strength of division of a network into communities (modules,clusters). Measures take values from range [-1, 1]. Values close to 1 indicates strong community structure. A value of 0 indicates that the community division is not better than random.

def modularity(graphframe:GraphFrame):Double

Strongly Connected Components

def stronglyConnectedComponents(graphframe:GraphFrame, maxIter:Int = 10):DataFrame

Embeddedness

This method computes the average embeddedness of neighbours of a given vertex.

def embeddedness(graphframe:GraphFrame):DataFrame

HITS

After measure computation, each vertex of graph will have assigned two scores (hub, authority). Where hub score is proportional to the sum of authority score of its neighbours, and authority score is proportional to sum of hub score of its neighbours.

def hits(graphframe:GraphFrame):DataFrame

Link Prediction

Adamic Adar

Adamic Adar is a measure used to compute the closeness of nodes based on their shared neighbors. This measure is defined as the inverted sum of degrees of the common neighbours for given two vertices.

def adamicAdar(graphframe:GraphFrame):DataFrame

Common Neighbors

Common Neighbours measure is defined as the number of common neighbours of two given vertices.

def commonNeighbors(graphframe:GraphFrame):DataFrame

Path Finding

Shortest Paths

This algorithm computes the shortest paths from each vertex to a given set of landmark vertices, taking edge direction into account.

def shortestPaths(graphframe:GraphFrame, landmarks:Array[Any]):DataFrame

Storage

DeepGraph supports a handpicked list of awesome distributed graph databases. An important use case is to leverage the power of connected data for contextualization of DataFrame-centric machine & deep learning. As important is the generation of knowledge graphs from insight and foresight revealed by the full spectrum of machine intelligence.

Dgraph is a native GraphQL graph database that is built to be distributed. This makes it highly scalable, performant, and blazing fast – even for complex queries over terabytes of data.

DeepGraph leverages Dgraph's Spark Connector to read & write vertices and edges from and to Dgraph.

HGraphDB exposes Apache HBase as a TinkerPop Graph Database. DeepGraph leverages a modification of Hortonworks Spark-on-HBase Connector (SHC) to read vertices and edges from HGraphDB's HBase backend and transforms them int a GraphFrame for further analysis.

About

DeepGraph supports a 360° view on graph technology and supports analytics, storage and visualization.

Topics

Resources

License

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages