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Managing Your Biological Data with Python 3

Origin Fork from https://github.com/re4lfl0w/ipython/tree/master/books/Managing_Your_Biological_Data_with_Python

I trans the code to Python 3

Managing Your Biological Data with Python

Why I chose this book

  • Bio-based books and study materials

The thought I heard while organizing this book

  • Learning Basic Python Grammar
  • It was an opportunity to look at how bio is using Python, but I need domain knowledge like pdb, protein structure.
  • Because I needed a little knowledge of biotechnology, I had been asking for two hours of study, but I was not interested in digging more. And when I learn too many subjects, I have skimmed the surface because I can neglect what I really have to do. My topic is Function, Debugging, Good Program, so it has a lot of IT characteristics.

Summary with IPython

  • 10. Devide a Program into Functions
    • PDB file format
    • Location-based data parsing method (silly, smart)
    • Module for module creation
  • 12. Debugging
    • debugging
    • list of error(SyntaxError, NameError, etc)
    • Handling Exceptions
  • 15. Writing Good Programs
    • Split a Program into Functions and Classes
    • Writing smaller programs
    • Writing Well-Formatted Code
    • How to Release Your Program to Other People

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