deeptools

Workshops, Course Schedule and Teaching Assistant Review from my time as a chosen Undergraduate Teaching Assistant for the University of Pittsburgh course, BIOSC1540 - Computational Genomics taught by Dr. Miler Lee.

bash unix bioinformatics rna-seq r university computational-biology genome-annotation chip-seq transcriptomics genome-browser differential-gene-expression teaching-assistant genome-alignment motif-finding computational-genomics deeptools

Updated Mar 18, 2019
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YogiOnBioinformatics / ChIP-Seq-Analysis-Nanog-and-H3K27Ac

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Independent project I undertook to perform a full ChIP-Seq analysis of the transcription factor Nanog in Zebrafish embryos.

linux bash high-performance-computing chip-seq histone-modifications hisat2 sra developmental-biology zebrafish danio-rerio computational-genomics deeptools

Updated Aug 10, 2020

sebastian-gregoricchio / Rseb

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An R-package for daily tasks required to handle biological data as well as avoid re-coding of small functions for quick but necessary data management.

rna-seq r statistics genomics ngs data-visualization data-visualisation chip-seq atac-seq bedtools daily-tasks datamining qpcr deeptools qpcr-analysis cutandtag

Updated Jun 3, 2024
R

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deeptools

Here are 7 public repositories matching this topic...

gtrichard / deepStats

adityamahadevaniyer / Cut-and-Tag

hisplan / docker-deeptools

jianhong / deepToolsDownstream

YogiOnBioinformatics / Teaching-Assistant-Computational-Genomics

YogiOnBioinformatics / ChIP-Seq-Analysis-Nanog-and-H3K27Ac

sebastian-gregoricchio / Rseb

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